Back

Cell Reports Physical Science

Elsevier BV

Preprints posted in the last 7 days, ranked by how well they match Cell Reports Physical Science's content profile, based on 18 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.

1
Conformational changes underlying electromechanical transduction in prestin resemble a transport transition in pendrin

Zhang, C.; Mariadasse, R.; Yang, J.; Bai, J.-P.; Santos-Sacchi, J.; Navaratnam, D. S.; Beckstein, O.

2026-06-08 biophysics 10.64898/2026.06.06.730624 medRxiv
Top 7%
0.0%
Show abstract

Prestin (SLC26A5), a membrane protein in cochlear outer hair cells, drives electromechanical transduction essential for mammalian hearing. Unlike other SLC26 anion transporters, prestin functions as a voltage-dependent molecular motor, transitioning between compact and expanded conformations. How this transition relates to the transporter cycle of SLC26 family members remains unclear. Here, multi-microsecond molecular dynamics simulations starting from the compact state reveal a rapid, spontaneous transition to an expanded state that resembles the inward-facing conformation of the anion exchanger pendrin (SLC26A4 from mouse). An accompanying transmembrane area expansion is localized to the inner membrane leaflet, likely leading to membrane bending. In line with this observation, reduced unitary sensor charge movement accompanies neutralization of charged residues localized near the inner leaflet. Simulations also uncover a previously uncharacterized compact conformation resembling outward-facing pendrin and predict an extracellular anion-binding site in prestin. In fact, in the presence of thiocyanate anions, we observe a previously unresolved binding site in a 3.27-[A] cryo-electron microscopy structure of prestin. Furthermore, like prestin, pendrin exhibits a non-linear capacitance, an indication of voltage-dependent conformational switching. Together, these findings suggest that prestin and pendrin share core structural and functional properties, notably parallels between expansion-contraction states and transporter function, though transition speeds may differ.

2
Sensorimotor recovery and neuropathic pain reduction after remotely delivered cognitive multisensory rehabilitation or remotely delivered exercise in adults with spinal cord injury: a pilot clinical trial.

Van de Winckel, A.; Herrmann, A. A.; Carpentier, S. T.; Bottale, S.; Lopez, R. L.; Rapacz, A. D.; Larson, S. J.; Deng, W.; Zhang, L.; Hendrickson, T. J.; Mueller, B. A.; Nourian, R.; Morse, L. R.; Lim, K. O.

2026-06-09 rehabilitation medicine and physical therapy 10.64898/2026.06.02.26354574 medRxiv
Top 10%
0.0%
Show abstract

Introduction: Reduced or lost sensation and movement after a spinal cord injury (SCI) impairs the brain s ability to accurately localize paralyzed body parts, causing deficits in its internal body map, or mental body representations (MBR). These deficits hinder functional recovery and contribute to neuropathic pain. Medications for neuropathic pain are often ineffective and carry side effects. Our pilot trials found that in-person Cognitive Multisensory Rehabilitation (CMR), a physical therapy restoring MBR, led to prolonged pain reduction, improved sensorimotor function, and enhanced brain function, to greater extent than adaptive fitness. To explore more accessible interventions for those in rural areas or with transportation challenges, we examined whether 12 weeks of remotely delivered CMR or exercise would (1) improve function and reduce pain; (2) increase brain activity and connectivity related to sensorimotor function and MBR in adults with SCI. Methods: Of 19 adults with SCI who consented, 15 (51+/-15 years old, 8+/-10 years post-SCI) were randomized to 12 weeks of remotely delivered CMR or exercise (45min, 3x/week). Eight reported neuropathic pain equal or greater than 3/10. The Numeric Pain Rating Scale (NPRS), ASIA Impairment Scale (AIS), and Neuromuscular Recovery Scale (NRS) assessed pain and sensorimotor function at baseline, post-intervention, and 6-month follow-up. Functional MRI included resting-state and four tasks: imagining feeling the left leg, imagining moving the left leg, whole-body movement imagery, and a sensation task. Results: After CMR (n=8), participants improved on AIS (large effect sizes: touch: d=1.30; pinprick: d=1.21; lower limb motor function: d=1.83). Exercise (n=7) produced smaller improvements (touch: d=0.35; pinprick: d=0.36; lower limb motor function: d=0.80). CMR showed greater NRS effect sizes (core: d=1.48; upper limb: d=0.69; lower limb: d=1.25) than exercise (core: d=0.31; upper limb: d=0.74; lower limb: d=0.83). Benefits persisted at follow-up for both AIS and NRS, especially in the CMR group. Highest neuropathic pain intensity decreased in both groups post-intervention (CMR: d=-0.61; exercise: d=-0.73) and at 6-month follow-up (CMR: d=-0.55; exercise: d=-0.55). Unlike previous studies, group effects for CMR were not found due to high heterogeneity. Increased task-based activation, including in the lateral occipital cortex involved in visual body perception and spatial awareness, was seen for the exercise group (n=5). Discussion: These preliminary results support the potential of remotely delivered CMR and exercise to improve function and reduce neuropathic pain in adults with SCI, highlighting the need for larger trials. Clinicaltrial.gov: NCT05870189

3
Reproductive health in Mexican women with systemic lupus erythematosus: pregnancy outcomes, menstrual irregularities and early menopause

Sevilla-Parra, G.; Bravo-Garcia, F.; Mier y Teran Guevara, M.; Montes-Garcia, A.; Schäfer, A.; Ochoa-Rodriguez, N.; Bienvenu Caballero, M.; Gonzalez Zenteno, S. G.; Pena-Ayala, A.; Tinajero-Nieto, L.; Torres-Valdez, E.; Martinez, D.; Hernandez-Ledesma, A. L.; Medina-Rivera, A.; Alpizar-Rodriguez, D.

2026-06-09 sexual and reproductive health 10.64898/2026.06.07.26354004 medRxiv
Top 10%
0.0%
Show abstract

Objective: To characterize pregnancy outcomes and menstrual irregularities in Mexican women with systemic lupus erythematosus (SLE) and identify clinical factors associated with adverse pregnancy outcomes and early-onset menopause. Methods: We conducted a cross-sectional study of women with SLE enrolled in the Mexican Lupus Registry (LupusRGMX) between May 2021 and September 2024. Clinical and reproductive data were collected using standardized questionnaires. Menopause was defined as the absence of menstruation for [≥]12 consecutive months, and early menopause as onset before age 40. Univariable and multivariable logistic regression analyses were used to identify factors associated with pregnancy complications and early menopause. Results: A total of 210 women were included. Median age was 38 years (IQR 29-46) and median disease duration was 4 years (IQR 1-10). Among women with a history of pregnancy (47%), full-term delivery predominated (61%), while pregnancy loss occurred in 26% and preterm delivery in 13%. Pregnancy complications were reported in 9.6%, most commonly preeclampsia (6.7%). Younger maternal age was independently associated with pregnancy complications (OR 0.89, 95% CI 0.83-0.95) and adverse outcomes (OR 0.95, 95% CI 0.92-0.98). Higher disease activity was associated with complications in univariable analysis. Most pregnancies (68.3%) occurred before diagnosis. Early menopause was observed in 6.2% and independently associated with longer disease duration and older age. Conclusion: Younger maternal age was independently associated with adverse pregnancy outcomes, whereas disease activity showed an association in univariable analysis. Most pregnancies occurred prior to SLE diagnosis. Early menopause was associated with longer disease duration, suggesting impact of cumulative disease burden on ovarian function.

4
Aperiodic and oscillatory activity of the human brain during induced emotional states

Park, H.; Hacker, C.; Cho, H.; Xie, T.; Simmons, A.; Tan, G.; Leuthardt, E. C.; Brunner, P.; Willie, J.

2026-06-09 neurology 10.64898/2026.06.02.26354146 medRxiv
Top 10%
0.0%
Show abstract

Normal emotional experience depends on dynamic modulation of neural excitability across limbic and prefrontal circuits, yet the spectral markers that reflect these shifts in humans remain incompletely understood. In this study, we combined a validated video-based emotion induction paradigm with stereotactic electroencephalography (SEEG) in 31 patients with drug-resistant epilepsy to investigate how positive and negative affective states modulate oscillatory and aperiodic (asynchronous) neural activity. Using spectral parameterization to dissociate oscillatory power from the aperiodic 1/f component, we found that emotional valence robustly altered the aperiodic slope in a regionally specific manner: negative valence flattened the slope in thalamus, posterior insula, and posterior cingulate cortex, whereas positive valence produced flattening in dorsolateral prefrontal cortex. Simultaneous oscillatory changes included increased high-frequency activity and decreased alpha/beta power during negative affect, and reduced alpha power during positive affect, which were elucidated after adjusting for broadband aperiodic spectral shifts. These effects persisted after controlling for audiovisual stimulus or physiological features and were not evident in simultaneously recorded scalp EEG, underscoring their localization to intracranial sites. Together, these results provide the first direct evidence that active induction of emotional states modulates the aperiodic slope of human intracranial field potentials, reflecting valence-dependent shifts in local circuit excitability. The findings highlight the 1/f slope as a sensitive neural marker of affective brain states and for mood dysregulation.

5
Age-Related Speech-in-Noise Hearing Loss in Parkinson's Disease and APOE E4 Carriers

Kmiecik, M. J.; Xu, W.; Weldon, C. H.; Guan, A.; McIntyre, M. H.; Bouchard, E. L.; 23andMe Research Team, ; Schneider, R. B.; Auton, A.; Aslibekyan, S.

2026-06-09 neurology 10.64898/2026.06.08.26355175 medRxiv
Top 10%
0.0%
Show abstract

Age-related hearing loss is a leading modifiable risk factor for dementia and is increasingly recognized as a non-motor feature of Parkinson's disease (PD). The apolipoprotein E (APOE) E4 allele is the strongest genetic risk factor for Alzheimer's disease and is associated with cognitive decline in PD, yet its relationship to hearing loss remains unclear. Therefore, we examined the independent and interactive effects of PD status and APOE E4 carrier status on age-related hearing loss using a validated web-based speech-in-noise (SIN) assessment in 239,620 23andMe Research Institute participants without PD and 4,361 PD cases. Generalized additive models for location, scale, and shape (GAMLSS) showed that both PD and APOE E4 independently exacerbated age-related hearing decline, with speech reception thresholds (SRTs) worsening non-linearly with advancing age, but without evidence of synergistic interaction. However, longitudinal analyses in a subcohort completing at least two assessments (1,434 PD cases; 36,242 controls) using GAMLSS mixed models showed a significant three-way interaction between PD status, APOE E4, and age2, such that SIN hearing loss accelerated more steeply with age in APOE E4 carriers with PD. Males and individuals with lower educational attainment also exhibited worse SIN hearing loss. These results identify APOE E4 carriers with PD as a priority population for hearing screening and intervention, and support the integration of SIN assessments into routine PD care to detect hearing decline that may compound cognitive and communicative burden in aging.

6
Subthalamic DBS Engages Right-lateralized Frontal Control to Improve Gait Adaptation in Parkinson's

Hanafi, I.; Pozzi, N. G.; Habib, R.; Falciglia, S.; Del Vecchio Del Vecchio, J.; Remore, L. G.; Marotta, G.; Buck, A.; Pezzoli, G.; Volkmann, J.; Isaias, I. U.; Palmisano, C.

2026-06-09 neurology 10.64898/2026.06.03.26354536 medRxiv
Top 10%
0.0%
Show abstract

Adapting ongoing gait patterns to environmental challenges is essential for safe navigation through the environment. Impairment of gait adaptation is common in many neurodegenerative disorders, such as Parkinson's disease (PD), where it hampers mobility and limits quality of life. The neural control of gait adaptation remains largely unclear, thereby limiting the development of targeted treatments, such as deep brain stimulation of the subthalamic nucleus (STN-DBS). We integrated clinical, kinematic, brain metabolic imaging, and electrophysiological data, obtained during a fully immersive virtual reality overground walking task, to characterize the neural underpinnings of gait adaptation performance during dynamic obstacle avoidance and its improvement with STN-DBS. Movement kinematics, brain oscillatory activity, and metabolic activation were simultaneously acquired in 12 patients with PD during rest and gait adaptation, under active or paused STN-DBS, using inertial measurement units, electroencephalography, and three separate [18F]fluorodeoxyglucose positron emission tomography scans. Eight age-matched healthy subjects completed the same task for comparative kinematic analyses. All patients showed significant clinical improvement with STN-DBS. During the gait adaptation task with paused stimulation, patients exhibited increased metabolic activity in the cerebellum and sensorimotor cortex. Active STN-DBS selectively enhanced thalamic and superior frontal gyrus (SFG) metabolism, while concomitantly reducing cerebellar uptake. Right-lateralized SFG metabolism correlated with gait adaptation performance, with DBS-driven shifts toward greater right SFG activity predicting the magnitude of gait adaptation improvement. This correlation was independent of baseline asymmetry in clinical impairment, electrode placement, or structural connectivity to the SFG. Of note, STN-DBS amplitude asymmetry emerged as an independent predictor of right-lateralization of SFG metabolism. EEG recordings confirmed this lateralized network modulation, with theta-band asymmetry paralleling PET findings. Our findings identify a lateralized thalamo-cortical network supporting gait adaptation in PD and highlight a distinctive role for the SFG. We further show that effective STN-DBS acts as a lateralized regulator, dynamically rebalancing cortico-thalamic circuits to support context-appropriate gait control. The observed right-hemispheric lateralization may foster novel image-guided programming strategies to enhance the consistency and effectiveness of gait control in PD.

7
Multimodal MRI Characterization of Nucleus Basalis of Meynert Degeneration: Structural Atrophy and Free-water Diffusion in Parkinson's Disease Cognitive Impairment

Negida, A.; Zaman, A.; Wyman-Chick, K. A.; Hallak, R.; Miller-Patterson, C.; Berman, B. D.; Ofori, E.; Barrett, M. J.

2026-06-09 neurology 10.64898/2026.06.08.26355183 medRxiv
Top 10%
0.0%
Show abstract

Background: Cognitive impairment in Parkinson's disease (PD) is linked to degeneration of the cholinergic basal forebrain, particularly cholinergic nucleus 4 (Ch4) in the nucleus basalis of Meynert. Structural and diffusion MRI separately detect this degeneration, but few studies have combined these modalities across the PD cognitive spectrum. Methods: We analyzed 92 participants: 14 healthy controls (HC), 35 PD with normal cognition (PD-NC), 33 with mild cognitive impairment (PD-MCI), and 10 with dementia (PDD). For Ch4 and cholinergic nuclei 1, 2, and 3 (Ch1-3) in the medial septal/diagonal band complex, we determined TIV-normalized gray matter density (GMD) and free-water (FW) fraction. We evaluated group differences, cognitive correlations, adjusted multivariable regression, and exploratory ROC discrimination. Results: Ch4 GMD was significantly lower in PDD compared to PD-MCI (p=0.007), PD-NC (p<0.001), and HC (p<0.001). Ch4 GMD was also lower in PD-MCI versus HC (p=0.028); the PD-MCI versus PD-NC difference was not significant after correction (p=0.074). Ch1-3 GMD was lower in PDD versus PD-NC (p=0.008) and HC (p=0.009). Ch4 and Ch1-3 FW were elevated in PDD versus all other groups (all p<0.01). Among PD patients (n=78), MoCA was positively correlated with Ch4 GMD ({rho}=0.49) and Ch1-3 GMD ({rho}=0.42) and negatively correlated with Ch4 FW ({rho}=-0.51) and Ch1-3 FW ({rho}=-0.40; all p<0.001). In the full four-metric model, Ch4 GMD and Ch4 FW were the only independent basal forebrain predictors (Ch4 GMD {beta}=+2.04, p<0.001; Ch4 FW {beta}=-1.46, p=0.005) of MoCA score. The combined Ch4 GMD + Ch4 FW model showed high discrimination for PDD versus non-demented PD (AUC=0.934; optimism-corrected AUC=0.925). Conclusions: Structural and free-water diffusion MRI provide complementary information about Ch4 degeneration in PD. The combined Ch4 model showed promising exploratory discrimination of PDD; validation in larger independent samples is needed.

8
Cross-Sectional Validation of an 8-Electrode Multi-Frequency Bioelectrical Impedance Analysis (BIA) Device Against Dual-Energy X-ray Absorptiometry (DEXA) for Body Composition Assessment in Indian Adults

Bheda, A.; Sharma, M.; Jokare, N.; Kapoor, S.; Chouksey, J.

2026-06-09 nutrition 10.64898/2026.05.24.26353564 medRxiv
Top 10%
0.0%
Show abstract

Background: Obesity is becoming a global health crisis, and it leads to various metabolic disorders. Body mass index fails to differentiate fat mass from lean mass and systematically misclassifies adiposity risk - a limitation particularly pronounced in South Asian adults, who exhibit characteristically elevated visceral adiposity and reduced appendicular lean mass at a normal BMI. The 2025 Lancet Commission explicitly recommends direct adiposity measurement beyond BMI for obesity diagnosis. Weight loss interventions - whether dietary, behavioural, or pharmacological - are consistently associated with concurrent reductions in both fat mass and lean mass, making body composition monitoring essential beyond scale weight alone. Although DEXA is globally accepted as a gold standard for body composition analysis, the accessibility of DEXA is limited, particularly in resource-constrained low and middle-income countries such as India. BIA devices are a convenient low-cost option to DEXA and can be used for body composition analysis more frequently than a DEXA scan to provide longitudinal data. The aim of this study is to validate 8 electrode BIA devices as a viable alternative to DEXA scan for the South Asian population. Methods: A prospective cross-sectional validation study was conducted following ethics committee approval, with a priori sample size estimation ( = 0.05, power = 80%). Fifty-eight healthy adults (n=58) underwent three BIA measurements and one DEXA scan each. To ensure statistical independence, the three BIA readings per participant were averaged, yielding 58 final measurements for validation. Body fat percentage, lean mass and fat mass were evaluated using Python with statistical analyses like Bland Altman analysis, Pearson correlation, ICC and regression analysis. Results: In this BIA vs DEXA study, the Pearson correlation was strong across all three outcomes (fat%: r = 0.97; fat mass: r = 0.98; lean mass: r = 0.96), with ICC (2,1) values of 0.94, 0.97, and 0.91 confirming excellent absolute agreement. Mean absolute error was 3.40% for fat percentage, 1.96 kg for fat mass, and 3.37 kg for lean mass. BIA systematically underestimated body fat percentage (bias -1.96%, 95% CI: -2.91% to -1.01%; LoA: -9.04% to +5.12%) and fat mass (bias -0.72 kg, 95% CI: -1.38 to -0.07 kg; LoA: -5.59 to +4.14 kg), while overestimating lean mass by +3.08 kg (95% CI: +2.34 to +3.82 kg; LoA: -2.46 to +8.62 kg). Conclusions: The 8-electrode BIA device shows clinically acceptable agreement with DEXA for body composition assessment in healthy Indian adults. It offers a radiation-free, cost-effective, accessible, and portable alternative to DEXA, making it suitable for longitudinal monitoring and trend detection. The device is particularly valuable for obesity screening and for tracking body composition changes during weight loss interventions at the population level, addressing the critical need for accessible body composition assessment in resource-limited settings.

9
Inequalities in physical fitness in children with hearing loss: a systematic review and meta-analysis with implications for inclusive physical education and school curriculum

Diaz-Franco, M. V.; Caniuqueo-Vargas, A.; Lasekan, O. A.; Castillo-Sarmiento, C. A.; Rodriguez-Martin, B.

2026-06-09 otolaryngology 10.64898/2026.06.08.26355131 medRxiv
Top 10%
0.0%
Show abstract

Background: Childhood and adolescent hearing loss affects not only communication and cognitive development but also motor skills and school participation. Consequently, it generates inequalities in learning and educational inclusion. Nevertheless, no systematic review has yet analyzed these differences from an inclusive education perspective. Methods: A systematic review with meta-analysis was conducted following PRISMA guidelines and registered in PROSPERO. Observational studies comparing physical fitness between children and adolescents with hearing loss and their hearing peers were included. Methodological quality was assessed using the Newcastle--Ottawa Scale, and standardized effect sizes were calculated with a random-effects model. Results: Five studies (n=404) were analyzed. Findings revealed significant differences in strength, agility, speed, and balance. Moreover, the meta-analysis showed a large standardized effect favoring hearing children (ES=-2.35; 95% CI: -3.34 to -1.37). Conclusions: Children and adolescents with hearing loss present significantly lower physical fitness, which may affect the planning of physical education activities if their capacities are misinterpreted. Implementing inclusive and adapted strategies within the school curriculum is essential to ensure equal opportunities, improve physical fitness, and promote educational equity.

10
Safety and Tolerability of Low Intensity Focused Ultrasound to the Anterior Insula in Patients with Fibromyalgia

Kapoor, A.; Ni, Y.; Isaac, G.; Keyes, D. C. V.; Russo-Stringer, E. A.; Legon, W.

2026-06-09 pain medicine 10.64898/2026.06.01.26354382 medRxiv
Top 10%
0.0%
Show abstract

Background: Low-intensity focused ultrasound (LIFU) is an emerging noninvasive neuromodulation technique capable of targeting deep cortical and subcortical structures with high spatial precision. In healthy human volunteers, LIFU has demonstrated a favorable safety and tolerability profile across multiple studies. However, its safety and tolerability in clinical populations remains poorly characterized, representing a critical barrier to clinical translation. Here, we prospectively evaluate the safety and tolerability of LIFU targeting the left dorsal anterior insula (dAI) in patients with fibromyalgia (FM). Methods: In a single-blind, sham-controlled, within-subjects crossover design, 13 individuals with FM (43.1 +/- 13.2 years; 12 female) received 10 minutes of active LIFU (500 kHz, 1 kHz PRF, 36% duty cycle, 4.2 W/cm2 Isppa; 100 x 1-second pulse trains with a 5-second inter-train interval) targeting the left dorsal anterior insula (dAI) or sham on separate visits. Safety was evaluated through neuroradiological review of post vs. pre LIFU FLAIR MRI, quantitative voxel-wise FLAIR analysis, and patient report of symptoms (ROS). Tolerability was assessed using an experience assessment. Efficacy of the LIFU intervention was assessed using quantitative sensory testing (QST) including temporal summation of pain (TSP) and conditioned pain modulation (CPM). Results: Neuroradiological review identified no new evidence of edema, microhemorrhage, acute ischemia, or white matter injury on post-LIFU structural imaging. Quantitative FLAIR analysis using contralateral-mirror-referenced relative FLAIR (rFLAIR) showed no significant within-subject change in the stimulated beam volume (delta rFLAIR = 0.002 +/- 0.025, t(12) = 0.30, P = 0.769, Cohen's dz = 0.08). No serious adverse events were documented and ROS indicated no change due to LIFU sonication. Participants rated the procedure as comfortable and could not distinguish active from sham LIFU. LIFU did not result in statistically significant changes for TSP (p = 0.797) or CPM (p = 0.465). Conclusions: Ten minutes of LIFU targeting the left dAI was safe and well tolerated in individuals with FM, with no neuroradiological or quantitative MRI evidence of tissue effects and no serious adverse events. Blinding was preserved, and participants rated the procedure as comfortable. Although no significant changes were observed in experimental pain measures, these findings support the feasibility of targeting deep salience and pain amplification circuitry with LIFU in patients with FM and provide a foundation for adequately powered efficacy trials.

11
Multi-region sampling of the human small intestine using an ingestible device

Fu, B.; DeSchepper, L. B.; Sun, J.; McKeithen-Mead, S. A.; Kapili, B.; Ochoa-Andersen, P.; Spencer, S. P.; Fardeen, T.; Ricardo, M.; El Kamari, V.; Sinha, S.; Relman, D. A.; Grembi, J. A.; Shalon, D.; Estrela, S.; Huang, K. C.

2026-06-10 gastroenterology 10.64898/2026.06.09.26353912 medRxiv
Top 10%
0.0%
Show abstract

The human small intestine (SI) plays a central role in nutrient processing, host-microbe interactions, and immune regulation, yet remains poorly characterized due to the lack of minimally disruptive sampling methods. Here, we present a protocol for deploying, recovering, and analyzing samples collected using an ingestible device that enables multi-region, lumen-targeted SI sampling during normal digestion. The device incorporates a ~30-cm collapsible tube wound into pH- or time-responsive layers that sequentially unfurl in situ, typically capturing three spatially ordered samples with high yield and reliable retrieval. This protocol outlines study design, participant handling, device recovery, contamination control, and standardized workflows for analyses, including cell quantification, culturomics, sequencing, and metabolomics. We further describe benchmarking approaches for evaluating spatial resolution and strategies for assay prioritization when sample volume is limiting. By reducing participant burden and facilitating integration with stool, saliva, and clinical metadata, this approach enables longitudinal and large-cohort studies linking SI microbial ecology and host physiology to human health.

12
More Than Results: A Qualitative Study on the Role of Person-Centered Genetic Counseling in Parkinson Disease Research

Verbrugge, J.; Fiallos, K.; Cook, L.; Miller, M.; Head, K. J.

2026-06-09 genetic and genomic medicine 10.64898/2026.06.03.26354465 medRxiv
Top 10%
0.0%
Show abstract

As genetic testing becomes increasingly integrated into Parkinson disease (PD) research, including targeted testing for variants in LRRK2 and GBA1, the return of individual research results is becoming more common. However, limited qualitative data exists regarding how research participants experience genetic results disclosure and post-test genetic counseling in PD research settings. We conducted semi-structured qualitative interviews with participants (n=13) enrolled in the Parkinson Precision Medicine Initiative (formerly Parkinson Progression Markers Initiative; PPMI) who had received PD-related genetic test results and post-test genetic counseling. Interviews were conducted 1 to 3 weeks following result disclosure and analyzed using thematic analysis with a primarily deductive coding approach informed by study aims and inductive identification of emergent themes. Four primary themes were identified: (1) personal connection and motivations for participation, (2) centrality of result disclosure and information preferences, (3) emotional experiences and support needs, and (4) communication quality and alignment with participant needs. Overall, our findings underscore the importance of person-centered genetic counseling within PD research. As return of genetic and biomarker results in research and clinical trial contexts expand, thoughtful integration of relational, informational, and communication-focused practices will be essential to support participant engagement and trust.

13
Distinct and shared genetics of kidney filtration function versus albuminuria revealed by multi-trait GWAS

de Hesselle, H. C.; Garben, B.-F.; Stark, K. J.; Warth, R.; Teumer, A.; Pattaro, C.; Heid, I. M.; Winkler, T. W.

2026-06-09 genetic and genomic medicine 10.64898/2026.06.08.26355141 medRxiv
Top 10%
0.0%
Show abstract

Chronic kidney disease is characterized by decreased glomerular filtration rate (eGFR, estimated from serum creatinine or cystatin C) or increased urinary albumin-to-creatinine-ratio (UACR). Genome-wide association studies provided the genetic make-up of these traits, but their overlap remained largely unknown. Our multi-trait GWAS (N=1M) identified 812 signals and multi-trait fine-mapping sharpened the identification of likely causal variants. Of 333 signals classified for filtration function or albuminuria, only 11 overlapped. Their effects on eGFR and UACR were directionally concordant, dominated by eGFR and independent of HbA1c or mean arterial pressure. Mapped genes pinpointed mechanisms related to glomerular filtration area (SHROOM3, EPB41L5) and sodium-mediated intraglomerular pressure (NRBP1, DPEP1/CHMP1A). Genetics of fluid intake resulted in shadow effects on UACR without albumin leakage into urine. Our multi-trait approach sharpened the identification of likely causal genes for kidney traits, demonstrated largely distinct genetics for filtration function versus albuminuria, and provided new biological insights into the overlap.

14
Increasing influenza vaccination rates among care home staff: Economic evaluation of the FluCare intervention within a cluster-RCT

Wagner, A. P.; Risebro, H.; Clark, A.; Stirling, S.; Sims, E.; Bion, V.; Blacklock, J.; Birt, L.; Bryant, R.; Cook, L.; Dean, T.; Wyn Griffiths, A.; Guillard, C.; Holland, R.; Jones, A. P.; Jones, L.; Katangwe-Chigamba, T.; Pitcher, J.; Scott, S.; Wright, D.; Patel, A.

2026-06-09 health economics 10.64898/2026.06.06.26355050 medRxiv
Top 10%
0.0%
Show abstract

Introduction Care home (CH) influenza vaccination of staff improves resident health, yet uptake remains low at just over 11% (England, 2025/2026). We report an economic evaluation (EE) of "FluCare", an intervention to increase staff influenza vaccination through: vaccination clinics at CHs; promotional materials; and CH financial incentives. Method Seventy-five CHs were randomised to FluCare or control. A cost-consequence analysis took the influenza vaccination programme funder perspective, but also extended to the National Health Service (NHS) and CH perspective. Costs included: influenza vaccination; administration fee; FluCare components; CH resident NHS utilisation. Outcomes were: staff influenza vaccination rates; staff sickness; and resident mortality. Sensitivity analyses excluded intervention CHs that did not host vaccination clinics. Results Compared to control CHs, adjusted analysis found intervention homes with a mean absolute increase in vaccination rates of 1.8% (95% CI: -6.0%, 10.8%; p=0.572) at an increased cost of {pound}451 (95% CI: {pound}239, {pound}675; p<0.001) to the vaccination programme funders: {pound}249 per additional percentage point (PAPP) per CH. Vaccination clinics were delivered late in the influenza season, with 80% taking place from February 2023. Including only intervention CHs that hosted staff flu vaccination clinics (23/35), increases the mean difference to 10.1% (95% CI: 0.9%, 21.9%; p=0.018) and costs to {pound}805 (95% CI: {pound}603, {pound}1,079; p<0.001): {pound}79 PAPP per CH. Differences between trial arms in other costs and outcomes were marginal and generally non-significant. Conclusions FluCare delivered little improvement when staff flu vaccination clinics did not occur and had little impact on other costs/outcomes. Cost-effectiveness depends on willingness-to-pay for increased staff vaccination, but cost PAPP per CH improved from {pound}249 to {pound}79 when only CHs hosting clinics were considered. Late implementation, likely reduced impact by limiting clinic delivery, as reflected in sensitivity analysis. Future evaluations should implement FluCare earlier in the season.

15
Characterizing Documented Psychosocial Stressors in Pediatric Psychiatric Emergencies with an Open-Weight Large Language Model

Hartlage, C. S.; Manning, E. R.; Bernard, J.; Vaish, S.; Gray, J.; Young, M.; Pestian, T.; Folger, A. T.; Tachinardi, P.; Mendonca, E. A.; Brokamp, C.

2026-06-09 health informatics 10.64898/2026.06.08.26354931 medRxiv
Top 10%
0.0%
Show abstract

Objective: To evaluate whether a locally hosted open-weight large language model (LLM) can extract documented psychosocial factors from pediatric psychiatric intake notes and apply validated extraction to a large emergency psychiatry cohort. Materials and Methods: We identified emergency department presentations at Cincinnati Children's Hospital Medical Center from January 1, 2016, through December 31, 2024, among patients younger than 18 years with psychiatric billing diagnoses. Using full-text intake notes, gpt-oss:120b classified peer conflict, sleep disruption, and school-related academic, attendance, and disciplinary issues as detected, negated, or indeterminate. Four human raters independently reviewed 50 notes. We compared Fleiss' kappa among humans alone versus humans plus the LLM, assessed repeated-query stability across 50 independent calls per note, and applied the workflow to all eligible notes. Results: Among 37,315 eligible admissions, 22,284 had eligible intake notes; 22,270 produced parseable JSON. In detected-versus-not-detected coding, human-plus-LLM reliability did not differ significantly from human-only reliability across measures (human {kappa} 0.71-0.94; human-plus-LLM {kappa} 0.70-0.93). Stability was associated with human agreement: mean LLM-human agreement increased from 42.6% for classifications with less than 80% stability to 82.7% for classifications with 100% stability (Pearson r = 0.36). Full-cohort extraction showed frequent and overlapping documented factors: sleep disruption was most frequently detected (57.7%), followed by peer conflict (47.2%), academic issues (43.4%), disciplinary issues (43.3%), and attendance issues (16.9%). Discussion: Agreement varied by construct and was strongest when repeated model outputs were stable. Conclusion: Locally hosted open-weight LLMs can support scalable structured extraction of documented psychosocial factors from pediatric psychiatric intake notes after local validation.

16
Technology acceptance of machine learning in life sciences: the role of hype perception and journal impact factor.

Serrano, A. E.

2026-06-09 health informatics 10.64898/2026.06.03.26354262 medRxiv
Top 10%
0.0%
Show abstract

Machine learning (ML) has emerged as a transformative technology across biomedical and life science sectors, with applications spanning drug discovery, medical imaging, genomics, and clinical decision support (Goecks et al., 2020; Patel et al., 2020). Despite exponential growth in ML-related publications, from fewer than 100 articles in 2003 to nearly 25,000 by 2021 (NCBI, 2022), adoption among industry professionals remains uneven and sector-dependent. Understanding what drives or inhibits this adoption is critical for organisations seeking to leverage ML capabilities in research and clinical practice. Technology adoption in organisational contexts has been extensively studied through the Technology Acceptance Model (TAM), originally proposed by Davis (1989) and subsequently extended to incorporate external variables influencing perceived usefulness (PU) and perceived ease of use (PEU) (Venkatesh & Davis, 1996). While TAM has been applied across multiple industries, its application within biomedical and life science contexts remains limited, and the industry-specific factors that shape ML acceptance in this sector have not been systematically examined. Two external variables are particularly relevant to life science professionals. First, the bibliometric journal impact factor (JIF) functions as a cognitive signal of scientific credibility, a sector where evidence-based decision-making is culturally embedded, and publication quality serves as a proxy for technological legitimacy (Garfield, 1996). Second, technology hype, operationalised through the Gartner Hype Cycle framework, represents a social influence variable that shapes organisational expectations and investment decisions around emerging technologies (Gartner Inc., 2018). Whether these variables influence ML acceptance among life science professionals, alongside individual knowledge and experience, has not been empirically tested. This study addresses that gap by investigating ML technology acceptance among 213 biomedical and life science professionals across EMEA, LATAM, and North America, using a cross-sectional quantitative survey and PLS-SEM analysis. The TAM model is extended with three external variables, JIF, technology hype, and prior knowledge and experience, to test their influence on PU and PEU in this specific professional context. Additionally, the study examines demographic and regional differences in ML acceptance, with particular attention to variation between academic researchers and healthcare professionals. The findings contribute a validated, sector-specific extension of TAM for life sciences, provide actionable insights for organisations seeking to accelerate ML implementation, and establish a framework for future subsector-specific research.

17
Stigmatization of Indigenous patients in healthcare: Co-development and validation of a measurement tool

Tremblay, M.-C.; Iradukunda, E.; Cassivi, C.; Breault, P.; Briere, E.; Collerette, C.; Fletcher, C.; Renaud, J.-S.; Beaulieu, M.

2026-06-09 health systems and quality improvement 10.64898/2026.06.06.26355055 medRxiv
Top 10%
0.0%
Show abstract

Introduction Indigenous peoples in Canada face persistent health inequities rooted in colonialism, systemic racism, discrimination and social exclusion, all of which operate with particular intensity within healthcare institutions. Despite a growing qualitative literature documenting the discrimination and stigmatisation of Indigenous people by healthcare professionals, no validated instrument existed in the Canadian context to measure the stigmatizing attitudes and behaviors of clinicians toward this population. Aim This study aimed to co-develop and validate an instrument using clinical case vignettes designed to capture the affective, cognitive, and behavioral dimensions of stigmatization of indigenous peoples. Method Following Boateng et al.'s three-phase scale development approach, a multidisciplinary team including Indigenous patient partners, researchers, clinicians, and measurement experts generated 244 items across three paired clinical vignettes addressing type 2 diabetes, chronic back pain, and depressive disorder. Each vignette was developed in two versions, one featuring an Indigenous patient (test) and one featuring a non-Indigenous patient (control), distinguished solely by name and origin. Content validity was assessed by an expert committee using a Content Validity Index. The instrument was subsequently administered to a sample of nurses and physicians from two canadian health institutions using a twelve-arm randomization design. Analyses were carried to assess the internal structure of the instrument, convergent and concurrent validity as well as internal consistency. Results Our results show that the instrument developed has good psychometric qualities, particularly in terms of internal consistency, concurrent validity and factor structure, which reflects the theoretical structure assumed. Concurrent validity of the tool with the M-PATAS scale demonstrated weak to moderate significant correlations. Developed through a participatory process centering Indigenous expertise and lived experience, this instrument constitutes a significant methodological advance in the study of racialized stigmatization in Canadian healthcare.

18
Temporal and climatic drivers of uncomplicated malaria in Ghana: A Region Generalised Additive Model analysis.

Akurugu, E.; Awine, T.; Seidu, B.; Peprah, N. Y.; Mohammed, W.; Boateng, P.; Abiwu, P. H. A. K.; Silal, S. P.

2026-06-09 infectious diseases 10.64898/2026.06.06.26355054 medRxiv
Top 10%
0.0%
Show abstract

Abstract Background Malaria remains a major public health challenge in Ghana, despite recent reductions in cases due to various interventions. The endemicity of the disease varies across regions, influenced by diverse seasonal and temporal factors that support mosquito proliferation and malaria cases. This study used a Generalised Additive Models to explore the impact of weather conditions on malaria cases in Ghana. Methods Generalised Additive Models were used to examine the nonlinear effects of weather conditions on malaria cases. Monthly aggregated malaria cases from the District Health Information Management System II and average monthly rainfall and temperature data from the Ghana Meteorological Agency were analysed, covering 2012 to 2023. Regional Generalised Additive Models incorporating weather variables were developed, fitted, and validated against observed data using model diagnostics to identify the most suitable model for each region. Results The analysis revealed complex temporal patterns in malaria cases across Ghana, influenced by seasonal and long-term trends. Regions constituting the Coastal and Transitional Forest zones exhibited bimodal peak malaria seasons, while the Guinea Savannah showed a unimodal peak. Significant interactions between rainfall and temperature were identified, particularly in the Eastern region, where higher rainfall combined with temperatures around 27-28 {degrees}C were associated with higher malaria cases, reflecting the complex and region-specific nature of meteorological influences. Conclusions The findings point to the dynamic and heterogeneous nature of malaria caseloads in Ghana, emphasising the need for region-specific control strategies tailored to local climatic conditions. A key recommendation is the systematic integration of meteorological data into the National Malaria Data Repository to enable continuous monitoring of climatic influences and support timely, evidence-based intervention decisions. Future research should incorporate socio-economic factors, intervention coverage data, vector surveillance, and demographic characteristics into mathematical modelling frameworks for a more comprehensive understanding of malaria cases in Ghana.

19
Polypore Mushroom Mycelia for Treatment of Active COVID-19 Infection: A Randomized Clinical Trial

Saxe, G.; Shubov, A.; Smith, C. N.; Golshan, S.; Shekhtman, T.; Wilson, S.; Slater, D.; Bair, Z. J.; Beathard, C.; Davis, R. A.; MacElhern, L.; Kao, L. K.; Senowitz, P.; Gosnell, N.; Buchholz, D.; Aguilar-Carreno, H.

2026-06-09 infectious diseases 10.64898/2026.06.01.26354267 medRxiv
Top 10%
0.0%
Show abstract

Use of fungal mycelia, which has antiviral properties, constitutes a novel strategy for addressing existing and newly emerging viral diseases. We evaluated safety and feasibility of fungal mycelia (Fomitopsis officinalis and Trametes versicolor, FoTv) for treatment of COVID-19 and assessed its antiviral effects and potential to reduce symptoms. In a randomized, double-blind, placebo-controlled, dual site (UCSD/UCLA medical centers) clinical trial we examined non-hospitalized patients who contracted mild-to-moderate COVID-19 [&le;] 96 hours, and experienced symptom onset [&le;] nine days, before enrollment. FoTv was safe, well-tolerated, and feasible for COVID-19 treatment. Minor differences in biochemical markers were observed between groups (26 FoTv, 24 Placebo). FoTv significantly reduced the number and severity of symptoms, particularly sore throat/cough, and in vitro SARS-CoV-2 (pseudovirus) cellular infection. In conclusion, FoTv was safe and reduced COVID-19 symptoms and cellular viral infection. Future studies should investigate therapeutic benefits of fungal mycelia for SARS-CoV-2 and other viruses. Clinicaltrials.gov registration:NCT04667247.

20
STELLAR: A flexible ensemble learning framework integrating rare variants to enhance polygenic risk prediction

Chen, T.; Li, X.; Mazumder, R.; Zhang, H.; Lin, X.

2026-06-09 genetic and genomic medicine 10.64898/2026.06.07.26355109 medRxiv
Top 10%
0.0%
Show abstract

Whole-exome and whole-genome sequencing technology has enabled the discovery of rare genetic variants associated with human health and diseases. However, existing statistical methods used for rare variant association testing are not well-suited for building genetic risk prediction models that jointly incorporate rare and common variants. We propose STELLAR, a flexible ensemble learning-based approach to compute rare variant polygenic risk scores (PRS) using association summary statistics to enhance conventional common variant PRS. Our method combines burden-based and penalty-based rare variant analysis and leverages functional annotation information to prioritize potentially causal variants within the prediction models. In simulation studies, PRS using STELLAR consistently showed the highest prediction accuracy compared to models using common variants alone or rare variant burdens. Applied to UK Biobank whole-exome sequencing data (n=310,831) across eight continuous and five binary traits, STELLAR significantly improved prediction accuracy, refined stratification of individuals at the highest genetic risk beyond common variants, and prioritized biologically relevant genes. STELLAR provides a scalable strategy to incorporate rare variants into PRS in addition to common variants, advancing precision risk prediction and enabling more comprehensive assessment of genetic contributions to complex diseases.